Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Cebpb

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

source_name
CEBPb_Male_TCPOBOP_27hr_Liver
strain
CD-1 (Charles River)
Sex
male
age
8 weeks
treatment
3 mg/kg TCPOBOP_ 27 h
tissue
liver
chip antibody
CEBPb (Santa-Cruz Biotechnology #SC-150)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
19676171
Reads aligned (%)
96.7
Duplicates removed (%)
21.3
Number of peaks
26187 (qval < 1E-05)

mm9

Number of total reads
19676171
Reads aligned (%)
96.3
Duplicates removed (%)
23.1
Number of peaks
26187 (qval < 1E-05)

Base call quality data from DBCLS SRA